Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.29■□□□□ 0.68
Syn1O88935 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syn1O88935 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Syn1O88935 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Syn1O88935 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Syn1O88935 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.28■□□□□ 0.68
Syn1O88935 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
Syn1O88935 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Syn1O88935 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.27■□□□□ 0.68
Syn1O88935 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.27■□□□□ 0.68
Syn1O88935 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Syn1O88935 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syn1O88935 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.27■□□□□ 0.68
Syn1O88935 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.27■□□□□ 0.68
Syn1O88935 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Syn1O88935 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.27■□□□□ 0.68
Syn1O88935 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.27■□□□□ 0.68
Syn1O88935 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.27■□□□□ 0.68
Syn1O88935 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syn1O88935 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Syn1O88935 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Syn1O88935 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Syn1O88935 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Syn1O88935 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.26■□□□□ 0.67
Syn1O88935 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.26■□□□□ 0.67
Syn1O88935 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Syn1O88935 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syn1O88935 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Syn1O88935 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Syn1O88935 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Syn1O88935 Gm13559-201ENSMUST00000120476 863 ntBASIC19.25■□□□□ 0.67
Syn1O88935 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.25■□□□□ 0.67
Syn1O88935 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.25■□□□□ 0.67
Syn1O88935 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.25■□□□□ 0.67
Syn1O88935 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.25■□□□□ 0.67
Syn1O88935 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.25■□□□□ 0.67
Syn1O88935 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syn1O88935 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Syn1O88935 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Syn1O88935 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.24■□□□□ 0.67
Syn1O88935 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.24■□□□□ 0.67
Syn1O88935 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syn1O88935 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Syn1O88935 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Gm7889-201ENSMUST00000185591 958 ntBASIC19.23■□□□□ 0.67
Syn1O88935 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.23■□□□□ 0.67
Syn1O88935 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.23■□□□□ 0.67
Syn1O88935 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syn1O88935 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Syn1O88935 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.22■□□□□ 0.67
Syn1O88935 Gm11539-201ENSMUST00000119837 557 ntBASIC19.22■□□□□ 0.67
Syn1O88935 Gm13436-201ENSMUST00000120418 567 ntBASIC19.22■□□□□ 0.67
Syn1O88935 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.22■□□□□ 0.67
Syn1O88935 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Syn1O88935 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.22■□□□□ 0.67
Syn1O88935 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syn1O88935 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Syn1O88935 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Syn1O88935 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syn1O88935 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms