Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdha4O88689 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdha4O88689 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdha4O88689 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha4O88689 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdha4O88689 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha4O88689 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.89■□□□□ 0.93
Pcdha4O88689 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha4O88689 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha4O88689 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha4O88689 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdha4O88689 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdha4O88689 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Pcdha4O88689 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdha4O88689 Gm6211-202ENSMUST00000167849 925 ntBASIC20.88■□□□□ 0.93
Pcdha4O88689 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdha4O88689 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdha4O88689 Gm10602-201ENSMUST00000098239 609 ntBASIC20.88■□□□□ 0.93
Pcdha4O88689 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pcdha4O88689 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha4O88689 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdha4O88689 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdha4O88689 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha4O88689 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha4O88689 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha4O88689 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha4O88689 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha4O88689 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdha4O88689 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdha4O88689 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdha4O88689 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha4O88689 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha4O88689 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha4O88689 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 Gm13148-201ENSMUST00000118892 745 ntBASIC20.85■□□□□ 0.93
Pcdha4O88689 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha4O88689 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha4O88689 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdha4O88689 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdha4O88689 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdha4O88689 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.84■□□□□ 0.93
Pcdha4O88689 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.84■□□□□ 0.93
Pcdha4O88689 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha4O88689 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdha4O88689 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.84■□□□□ 0.93
Pcdha4O88689 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdha4O88689 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdha4O88689 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdha4O88689 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha4O88689 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Pcdha4O88689 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha4O88689 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.83■□□□□ 0.92
Pcdha4O88689 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha4O88689 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdha4O88689 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha4O88689 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha4O88689 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms