Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc28a2O88627 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc28a2O88627 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc28a2O88627 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc28a2O88627 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc28a2O88627 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Slc28a2O88627 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc28a2O88627 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.57■□□□□ 0.24
Slc28a2O88627 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc28a2O88627 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Slc28a2O88627 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc28a2O88627 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.56■□□□□ 0.24
Slc28a2O88627 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.56■□□□□ 0.24
Slc28a2O88627 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.56■□□□□ 0.24
Slc28a2O88627 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a2O88627 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.55■□□□□ 0.24
Slc28a2O88627 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Slc28a2O88627 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Slc28a2O88627 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.55■□□□□ 0.24
Slc28a2O88627 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.55■□□□□ 0.24
Slc28a2O88627 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a2O88627 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Slc28a2O88627 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Grk6-206ENSMUST00000224995 2971 ntBASIC16.54■□□□□ 0.24
Slc28a2O88627 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Slc28a2O88627 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Gm11421-201ENSMUST00000122124 294 ntBASIC16.54■□□□□ 0.24
Slc28a2O88627 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Gm43173-201ENSMUST00000202246 593 ntBASIC16.54■□□□□ 0.24
Slc28a2O88627 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.54■□□□□ 0.24
Slc28a2O88627 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Slc28a2O88627 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.54■□□□□ 0.24
Slc28a2O88627 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a2O88627 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.53■□□□□ 0.24
Slc28a2O88627 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Slc28a2O88627 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Smad6-203ENSMUST00000179458 273 ntBASIC16.53■□□□□ 0.24
Slc28a2O88627 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.53■□□□□ 0.24
Slc28a2O88627 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Gm6139-201ENSMUST00000079261 882 ntBASIC16.53■□□□□ 0.24
Slc28a2O88627 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Slc28a2O88627 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a2O88627 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a2O88627 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a2O88627 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a2O88627 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms