Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Capns1O88456 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Capns1O88456 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Capns1O88456 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.22■□□□□ 0.35
Capns1O88456 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.21■□□□□ 0.35
Capns1O88456 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.21■□□□□ 0.35
Capns1O88456 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.21■□□□□ 0.35
Capns1O88456 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.21■□□□□ 0.35
Capns1O88456 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Capns1O88456 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Capns1O88456 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Capns1O88456 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.2■□□□□ 0.34
Capns1O88456 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Capns1O88456 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Capns1O88456 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Capns1O88456 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Capns1O88456 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Capns1O88456 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Capns1O88456 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Capns1O88456 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
Capns1O88456 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Capns1O88456 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.19■□□□□ 0.34
Capns1O88456 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Capns1O88456 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Capns1O88456 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Capns1O88456 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Capns1O88456 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Capns1O88456 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.18■□□□□ 0.34
Capns1O88456 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Gm7291-201ENSMUST00000199147 382 ntBASIC17.18■□□□□ 0.34
Capns1O88456 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.18■□□□□ 0.34
Capns1O88456 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Capns1O88456 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.18■□□□□ 0.34
Capns1O88456 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Capns1O88456 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.18■□□□□ 0.34
Capns1O88456 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.18■□□□□ 0.34
Capns1O88456 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.17■□□□□ 0.34
Capns1O88456 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Capns1O88456 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Capns1O88456 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Capns1O88456 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.17■□□□□ 0.34
Capns1O88456 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Capns1O88456 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Capns1O88456 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Capns1O88456 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Capns1O88456 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.17■□□□□ 0.34
Capns1O88456 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Capns1O88456 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.16■□□□□ 0.34
Capns1O88456 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Capns1O88456 Gm8493-201ENSMUST00000196881 489 ntBASIC17.16■□□□□ 0.34
Capns1O88456 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.16■□□□□ 0.34
Capns1O88456 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.16■□□□□ 0.34
Capns1O88456 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.16■□□□□ 0.34
Capns1O88456 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms