Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.7■□□□□ 0.74
Ttc3O88196 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ttc3O88196 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc3O88196 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.69■□□□□ 0.74
Ttc3O88196 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc3O88196 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Ttc3O88196 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.68■□□□□ 0.74
Ttc3O88196 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc3O88196 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ttc3O88196 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc3O88196 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc3O88196 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.67■□□□□ 0.74
Ttc3O88196 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc3O88196 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc3O88196 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.67■□□□□ 0.74
Ttc3O88196 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc3O88196 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Gm10698-201ENSMUST00000182663 604 ntBASIC19.66■□□□□ 0.74
Ttc3O88196 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ttc3O88196 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ttc3O88196 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Gm13158-201ENSMUST00000122007 736 ntBASIC19.66■□□□□ 0.74
Ttc3O88196 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.66■□□□□ 0.74
Ttc3O88196 Gm22325-201ENSMUST00000158904 308 ntBASIC19.66■□□□□ 0.74
Ttc3O88196 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.66■□□□□ 0.74
Ttc3O88196 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ttc3O88196 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.66■□□□□ 0.74
Ttc3O88196 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc3O88196 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ttc3O88196 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.65■□□□□ 0.74
Ttc3O88196 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ttc3O88196 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.65■□□□□ 0.74
Ttc3O88196 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.65■□□□□ 0.74
Ttc3O88196 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.65■□□□□ 0.74
Ttc3O88196 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc3O88196 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.64■□□□□ 0.73
Ttc3O88196 Gm11927-201ENSMUST00000118472 759 ntBASIC19.64■□□□□ 0.73
Ttc3O88196 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc3O88196 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.64■□□□□ 0.73
Ttc3O88196 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.64■□□□□ 0.73
Ttc3O88196 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.64■□□□□ 0.73
Ttc3O88196 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc3O88196 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Ttc3O88196 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc3O88196 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc3O88196 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
Ttc3O88196 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.63■□□□□ 0.73
Ttc3O88196 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.63■□□□□ 0.73
Ttc3O88196 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.63■□□□□ 0.73
Ttc3O88196 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc3O88196 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc3O88196 Gm715-201ENSMUST00000117865 831 ntBASIC19.62■□□□□ 0.73
Ttc3O88196 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.62■□□□□ 0.73
Ttc3O88196 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc3O88196 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ttc3O88196 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc3O88196 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ttc3O88196 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc3O88196 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms