Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim3O70209 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim3O70209 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim3O70209 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim3O70209 Gm12922-201ENSMUST00000120626 809 ntBASIC16.92■□□□□ 0.3
Pdlim3O70209 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.92■□□□□ 0.3
Pdlim3O70209 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim3O70209 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.92■□□□□ 0.3
Pdlim3O70209 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.92■□□□□ 0.3
Pdlim3O70209 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pdlim3O70209 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim3O70209 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim3O70209 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim3O70209 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim3O70209 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim3O70209 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim3O70209 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim3O70209 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.91■□□□□ 0.3
Pdlim3O70209 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim3O70209 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.91■□□□□ 0.3
Pdlim3O70209 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pdlim3O70209 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim3O70209 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.9■□□□□ 0.3
Pdlim3O70209 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pdlim3O70209 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim3O70209 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim3O70209 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pdlim3O70209 Rps24-207ENSMUST00000224568 714 ntBASIC16.9■□□□□ 0.3
Pdlim3O70209 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim3O70209 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim3O70209 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pdlim3O70209 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.9■□□□□ 0.3
Pdlim3O70209 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim3O70209 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim3O70209 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.89■□□□□ 0.3
Pdlim3O70209 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pdlim3O70209 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim3O70209 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim3O70209 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim3O70209 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim3O70209 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Pdlim3O70209 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim3O70209 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim3O70209 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim3O70209 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim3O70209 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim3O70209 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim3O70209 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Pdlim3O70209 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.88■□□□□ 0.29
Pdlim3O70209 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.88■□□□□ 0.29
Pdlim3O70209 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.88■□□□□ 0.29
Pdlim3O70209 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.88■□□□□ 0.29
Pdlim3O70209 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim3O70209 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pdlim3O70209 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.87■□□□□ 0.29
Pdlim3O70209 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.87■□□□□ 0.29
Pdlim3O70209 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.87■□□□□ 0.29
Pdlim3O70209 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pdlim3O70209 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pdlim3O70209 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Spcs1-204ENSMUST00000226782 949 ntBASIC16.87■□□□□ 0.29
Pdlim3O70209 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.87■□□□□ 0.29
Pdlim3O70209 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pdlim3O70209 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pdlim3O70209 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim3O70209 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pdlim3O70209 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pdlim3O70209 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.86■□□□□ 0.29
Pdlim3O70209 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pdlim3O70209 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms