Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Rdh5O55240 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh5O55240 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.68■□□□□ 0.42
Rdh5O55240 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rdh5O55240 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh5O55240 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.68■□□□□ 0.42
Rdh5O55240 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rdh5O55240 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.67■□□□□ 0.42
Rdh5O55240 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.67■□□□□ 0.42
Rdh5O55240 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.67■□□□□ 0.42
Rdh5O55240 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.67■□□□□ 0.42
Rdh5O55240 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.67■□□□□ 0.42
Rdh5O55240 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
Rdh5O55240 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rdh5O55240 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh5O55240 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Rdh5O55240 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Gm13234-201ENSMUST00000120010 747 ntBASIC17.66■□□□□ 0.42
Rdh5O55240 Gm26571-201ENSMUST00000181399 666 ntBASIC17.66■□□□□ 0.42
Rdh5O55240 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Gm27405-201ENSMUST00000184201 112 ntBASIC17.66■□□□□ 0.42
Rdh5O55240 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Gm18671-201ENSMUST00000214826 683 ntBASIC17.66■□□□□ 0.42
Rdh5O55240 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.66■□□□□ 0.42
Rdh5O55240 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rdh5O55240 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Rdh5O55240 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh5O55240 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.65■□□□□ 0.42
Rdh5O55240 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.65■□□□□ 0.42
Rdh5O55240 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rdh5O55240 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Gm13146-201ENSMUST00000118508 780 ntBASIC17.65■□□□□ 0.42
Rdh5O55240 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.65■□□□□ 0.42
Rdh5O55240 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rdh5O55240 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh5O55240 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rdh5O55240 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rdh5O55240 Gm42778-201ENSMUST00000199644 553 ntBASIC17.64■□□□□ 0.41
Rdh5O55240 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.64■□□□□ 0.41
Rdh5O55240 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh5O55240 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 Gm10849-201ENSMUST00000100397 618 ntBASIC17.63■□□□□ 0.41
Rdh5O55240 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rdh5O55240 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms