Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Itgb3O54890 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.82■□□□□ 0.76
Itgb3O54890 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.82■□□□□ 0.76
Itgb3O54890 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.82■□□□□ 0.76
Itgb3O54890 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Itgb3O54890 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Itgb3O54890 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Itgb3O54890 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Itgb3O54890 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Itgb3O54890 Gm12441-201ENSMUST00000121806 588 ntBASIC19.81■□□□□ 0.76
Itgb3O54890 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Itgb3O54890 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Itgb3O54890 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Itgb3O54890 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Itgb3O54890 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Itgb3O54890 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Itgb3O54890 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Itgb3O54890 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Itgb3O54890 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Itgb3O54890 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Itgb3O54890 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Itgb3O54890 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Itgb3O54890 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Itgb3O54890 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Itgb3O54890 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Itgb3O54890 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.8■□□□□ 0.76
Itgb3O54890 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.8■□□□□ 0.76
Itgb3O54890 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Itgb3O54890 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Gm26524-201ENSMUST00000192339 390 ntBASIC19.79■□□□□ 0.76
Itgb3O54890 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Itgb3O54890 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Itgb3O54890 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Itgb3O54890 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Itgb3O54890 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Itgb3O54890 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Itgb3O54890 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.78■□□□□ 0.76
Itgb3O54890 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Itgb3O54890 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.78■□□□□ 0.76
Itgb3O54890 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Itgb3O54890 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Itgb3O54890 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Itgb3O54890 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Itgb3O54890 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.77■□□□□ 0.76
Itgb3O54890 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.77■□□□□ 0.76
Itgb3O54890 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Itgb3O54890 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.77■□□□□ 0.76
Itgb3O54890 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.77■□□□□ 0.76
Itgb3O54890 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Itgb3O54890 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Itgb3O54890 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.77■□□□□ 0.76
Itgb3O54890 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Itgb3O54890 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Itgb3O54890 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.76■□□□□ 0.75
Itgb3O54890 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.76■□□□□ 0.75
Itgb3O54890 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Itgb3O54890 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb3O54890 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.75■□□□□ 0.75
Itgb3O54890 Gm27011-201ENSMUST00000182352 972 ntBASIC19.75■□□□□ 0.75
Itgb3O54890 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.75■□□□□ 0.75
Itgb3O54890 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb3O54890 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb3O54890 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb3O54890 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Itgb3O54890 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb3O54890 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Itgb3O54890 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.74■□□□□ 0.75
Itgb3O54890 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb3O54890 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb3O54890 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.74■□□□□ 0.75
Itgb3O54890 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Itgb3O54890 Rab3c-203ENSMUST00000224180 967 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms