Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Matn3O35701 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Matn3O35701 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Matn3O35701 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Matn3O35701 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Matn3O35701 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Matn3O35701 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Matn3O35701 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Matn3O35701 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.93■□□□□ 0.3
Matn3O35701 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
Matn3O35701 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.93■□□□□ 0.3
Matn3O35701 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.93■□□□□ 0.3
Matn3O35701 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Matn3O35701 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Matn3O35701 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Matn3O35701 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Matn3O35701 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.92■□□□□ 0.3
Matn3O35701 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.92■□□□□ 0.3
Matn3O35701 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.92■□□□□ 0.3
Matn3O35701 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.92■□□□□ 0.3
Matn3O35701 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Matn3O35701 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Matn3O35701 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Matn3O35701 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.92■□□□□ 0.3
Matn3O35701 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.91■□□□□ 0.3
Matn3O35701 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.91■□□□□ 0.3
Matn3O35701 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.91■□□□□ 0.3
Matn3O35701 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.91■□□□□ 0.3
Matn3O35701 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Matn3O35701 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.91■□□□□ 0.3
Matn3O35701 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.91■□□□□ 0.3
Matn3O35701 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Matn3O35701 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Matn3O35701 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Matn3O35701 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Matn3O35701 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.9■□□□□ 0.3
Matn3O35701 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.9■□□□□ 0.3
Matn3O35701 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Matn3O35701 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Matn3O35701 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Matn3O35701 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Matn3O35701 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Matn3O35701 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Matn3O35701 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Matn3O35701 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.89■□□□□ 0.29
Matn3O35701 Gm7417-201ENSMUST00000192950 473 ntBASIC16.89■□□□□ 0.29
Matn3O35701 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Matn3O35701 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Matn3O35701 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Matn3O35701 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Matn3O35701 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms