Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf11O35235 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.57□□□□□ -0.08
Tnfsf11O35235 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.57□□□□□ -0.08
Tnfsf11O35235 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf11O35235 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.56□□□□□ -0.08
Tnfsf11O35235 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.56□□□□□ -0.08
Tnfsf11O35235 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.56□□□□□ -0.08
Tnfsf11O35235 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf11O35235 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfsf11O35235 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfsf11O35235 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.54□□□□□ -0.08
Tnfsf11O35235 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.53□□□□□ -0.08
Tnfsf11O35235 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.53□□□□□ -0.08
Tnfsf11O35235 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfsf11O35235 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfsf11O35235 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Tnfsf11O35235 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf11O35235 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Tnfsf11O35235 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.52□□□□□ -0.08
Tnfsf11O35235 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf11O35235 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms