Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Gm21788J3QNH3 Gm40848-201ENSMUST00000221998 324 ntBASIC15.79■□□□□ 0.12
Gm21788J3QNH3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm21788J3QNH3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm21788J3QNH3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Gm21788J3QNH3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Gm21788J3QNH3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm21788J3QNH3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm21788J3QNH3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Gm43017-201ENSMUST00000198296 752 ntBASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm21788J3QNH3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Gm21788J3QNH3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm21788J3QNH3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm21788J3QNH3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm21788J3QNH3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm21788J3QNH3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm21788J3QNH3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm21788J3QNH3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm21788J3QNH3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm21788J3QNH3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm21788J3QNH3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.73■□□□□ 0.11
Gm21788J3QNH3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms