Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.17■□□□□ 0.66
Trim55G3X8Y1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Trim55G3X8Y1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim55G3X8Y1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim55G3X8Y1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trim55G3X8Y1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim55G3X8Y1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim55G3X8Y1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim55G3X8Y1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim55G3X8Y1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim55G3X8Y1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms