Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.18■□□□□ 0.66
Atf6F6VAN0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf6F6VAN0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf6F6VAN0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.16■□□□□ 0.66
Atf6F6VAN0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf6F6VAN0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf6F6VAN0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atf6F6VAN0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atf6F6VAN0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atf6F6VAN0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.13■□□□□ 0.65
Atf6F6VAN0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6F6VAN0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.13■□□□□ 0.65
Atf6F6VAN0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atf6F6VAN0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Gm13234-201ENSMUST00000120010 747 ntBASIC19.12■□□□□ 0.65
Atf6F6VAN0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atf6F6VAN0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms