Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Gm27275-201ENSMUST00000184318 272 ntBASIC18.96■□□□□ 0.63
Ccdc149F6V035 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.96■□□□□ 0.63
Ccdc149F6V035 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.96■□□□□ 0.63
Ccdc149F6V035 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ccdc149F6V035 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc149F6V035 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc149F6V035 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.93■□□□□ 0.62
Ccdc149F6V035 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc149F6V035 Dio3-201ENSMUST00000097228 1449 ntBASIC18.92■□□□□ 0.62
Ccdc149F6V035 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc149F6V035 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc149F6V035 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc149F6V035 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc149F6V035 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ccdc149F6V035 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc149F6V035 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Ccdc149F6V035 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc149F6V035 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc149F6V035 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms