Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Hfm1D3Z4R1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Hfm1D3Z4R1 Gm45640-201ENSMUST00000210665 1896 ntBASIC26.55■■□□□ 1.84
Hfm1D3Z4R1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC26.54■■□□□ 1.84
Hfm1D3Z4R1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hfm1D3Z4R1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
Hfm1D3Z4R1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hfm1D3Z4R1 Gm6659-201ENSMUST00000174752 547 ntBASIC26.54■■□□□ 1.84
Hfm1D3Z4R1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hfm1D3Z4R1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Hfm1D3Z4R1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Gm10138-203ENSMUST00000206952 366 ntBASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hfm1D3Z4R1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hfm1D3Z4R1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Hfm1D3Z4R1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Hfm1D3Z4R1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Hfm1D3Z4R1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC26.51■■□□□ 1.83
Hfm1D3Z4R1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Hfm1D3Z4R1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Hfm1D3Z4R1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Hfm1D3Z4R1 Gm45560-201ENSMUST00000211492 1472 ntBASIC26.51■■□□□ 1.83
Hfm1D3Z4R1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Hfm1D3Z4R1 Gm15375-201ENSMUST00000119510 849 ntBASIC26.49■■□□□ 1.83
Hfm1D3Z4R1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Hfm1D3Z4R1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Hfm1D3Z4R1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC26.48■■□□□ 1.83
Hfm1D3Z4R1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Hfm1D3Z4R1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Hfm1D3Z4R1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC26.48■■□□□ 1.83
Hfm1D3Z4R1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Hfm1D3Z4R1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Hfm1D3Z4R1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Hfm1D3Z4R1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Gm8309-201ENSMUST00000206627 1448 ntBASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Gm37352-201ENSMUST00000193908 2181 ntBASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Gm37292-201ENSMUST00000192062 758 ntBASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Hfm1D3Z4R1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Gm42545-201ENSMUST00000202755 922 ntBASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Timm23-208ENSMUST00000226683 750 ntBASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Hfm1D3Z4R1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Hfm1D3Z4R1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Hfm1D3Z4R1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Hfm1D3Z4R1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Hfm1D3Z4R1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Hfm1D3Z4R1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Hfm1D3Z4R1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Otx2os1-204ENSMUST00000227221 751 ntBASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Hfm1D3Z4R1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hfm1D3Z4R1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Hfm1D3Z4R1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC26.43■■□□□ 1.82
Hfm1D3Z4R1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hfm1D3Z4R1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hfm1D3Z4R1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hfm1D3Z4R1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms