Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim30cD3YVI9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim30cD3YVI9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim30cD3YVI9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim30cD3YVI9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim30cD3YVI9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Gm18284-201ENSMUST00000172604 624 ntBASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim30cD3YVI9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim30cD3YVI9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim30cD3YVI9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30cD3YVI9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trim30cD3YVI9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim30cD3YVI9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.26■□□□□ 0.83
Trim30cD3YVI9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Gm8495-201ENSMUST00000188740 694 ntBASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30cD3YVI9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms