Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Gm2399-201ENSMUST00000104944 225 ntBASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ptchd4B9EKX1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptchd4B9EKX1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ptchd4B9EKX1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ptchd4B9EKX1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Gm18666-201ENSMUST00000190039 958 ntBASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptchd4B9EKX1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptchd4B9EKX1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptchd4B9EKX1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ptchd4B9EKX1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ptchd4B9EKX1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptchd4B9EKX1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms