Protein–RNA interactions for Protein: B1AY40

Ssxb8, MCG1044712, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb8B1AY40 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssxb8B1AY40 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssxb8B1AY40 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssxb8B1AY40 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssxb8B1AY40 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.07■□□□□ 0.48
Ssxb8B1AY40 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Ssxb8B1AY40 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssxb8B1AY40 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Spcs1-204ENSMUST00000226782 949 ntBASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ssxb8B1AY40 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssxb8B1AY40 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssxb8B1AY40 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssxb8B1AY40 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ssxb8B1AY40 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssxb8B1AY40 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms