Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a6B1AVK5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a6B1AVK5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Gm18025-201ENSMUST00000221733 862 ntBASIC19.46■□□□□ 0.71
Col4a6B1AVK5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a6B1AVK5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a6B1AVK5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a6B1AVK5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Gm3375-201ENSMUST00000203929 796 ntBASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a6B1AVK5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.42■□□□□ 0.7
Col4a6B1AVK5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a6B1AVK5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col4a6B1AVK5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.4■□□□□ 0.7
Col4a6B1AVK5 Gm43183-201ENSMUST00000200632 547 ntBASIC19.4■□□□□ 0.7
Col4a6B1AVK5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col4a6B1AVK5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a6B1AVK5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a6B1AVK5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a6B1AVK5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col4a6B1AVK5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a6B1AVK5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms