Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Gm38285-201ENSMUST00000192928 922 ntBASIC9.98□□□□□ -0.81
Ubr4A2AN08 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC9.98□□□□□ -0.81
Ubr4A2AN08 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Gm5264-201ENSMUST00000190584 848 ntBASIC9.97□□□□□ -0.81
Ubr4A2AN08 Il3ra-202ENSMUST00000223589 738 ntBASIC9.97□□□□□ -0.81
Ubr4A2AN08 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Gm27357-201ENSMUST00000183754 135 ntBASIC9.97□□□□□ -0.81
Ubr4A2AN08 Gm5587-201ENSMUST00000206270 674 ntBASIC9.97□□□□□ -0.81
Ubr4A2AN08 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 AC124581.1-201ENSMUST00000225416 1399 ntBASIC9.97□□□□□ -0.81
Ubr4A2AN08 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Gm14127-201ENSMUST00000117906 678 ntBASIC9.97□□□□□ -0.81
Ubr4A2AN08 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC9.97□□□□□ -0.81
Ubr4A2AN08 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 Gm28659-201ENSMUST00000188013 759 ntBASIC9.96□□□□□ -0.81
Ubr4A2AN08 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.96□□□□□ -0.81
Ubr4A2AN08 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ubr4A2AN08 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC9.96□□□□□ -0.81
Ubr4A2AN08 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Gm27459-201ENSMUST00000184860 107 ntBASIC9.96□□□□□ -0.82
Ubr4A2AN08 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Gm23935-201ENSMUST00000102303 57 ntBASIC9.96□□□□□ -0.82
Ubr4A2AN08 Gm24270-201ENSMUST00000102326 57 ntBASIC9.96□□□□□ -0.82
Ubr4A2AN08 Gm24245-201ENSMUST00000157318 57 ntBASIC9.96□□□□□ -0.82
Ubr4A2AN08 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Birc2-201ENSMUST00000054878 378 ntBASIC9.96□□□□□ -0.82
Ubr4A2AN08 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Ubr4A2AN08 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Gm43347-201ENSMUST00000200226 580 ntBASIC9.95□□□□□ -0.82
Ubr4A2AN08 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Gm6802-201ENSMUST00000167843 1983 ntBASIC9.95□□□□□ -0.82
Ubr4A2AN08 Mir8098-201ENSMUST00000184011 137 ntBASIC9.95□□□□□ -0.82
Ubr4A2AN08 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Gm27742-201ENSMUST00000184667 60 ntBASIC9.95□□□□□ -0.82
Ubr4A2AN08 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ubr4A2AN08 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.94□□□□□ -0.82
Ubr4A2AN08 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms