Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13□□□□□ -0.33
Trbv13-2A0A140T8N6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv13-2A0A140T8N6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13□□□□□ -0.33
Trbv13-2A0A140T8N6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv13-2A0A140T8N6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv13-2A0A140T8N6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv13-2A0A140T8N6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv13-2A0A140T8N6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Gm13234-201ENSMUST00000120010 747 ntBASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-2A0A140T8N6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv13-2A0A140T8N6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Gm5874-201ENSMUST00000096101 508 ntBASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-2A0A140T8N6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-2A0A140T8N6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-2A0A140T8N6 Golph3-205ENSMUST00000228671 2842 ntBASIC12.96□□□□□ -0.34
Trbv13-2A0A140T8N6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-2A0A140T8N6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-2A0A140T8N6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trbv13-2A0A140T8N6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-2A0A140T8N6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-2A0A140T8N6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms