Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.28■■□□□ 1.16
Cfap99A0A140LIX9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.28■■□□□ 1.16
Cfap99A0A140LIX9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap99A0A140LIX9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap99A0A140LIX9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap99A0A140LIX9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap99A0A140LIX9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.27■■□□□ 1.15
Cfap99A0A140LIX9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Cfap99A0A140LIX9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Gm37856-201ENSMUST00000191634 999 ntBASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap99A0A140LIX9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Gm10812-201ENSMUST00000099864 546 ntBASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap99A0A140LIX9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap99A0A140LIX9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Cfap99A0A140LIX9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cfap99A0A140LIX9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cfap99A0A140LIX9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.21■■□□□ 1.15
Cfap99A0A140LIX9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cfap99A0A140LIX9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cfap99A0A140LIX9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cfap99A0A140LIX9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Cfap99A0A140LIX9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.2■■□□□ 1.14
Cfap99A0A140LIX9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cfap99A0A140LIX9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Cfap99A0A140LIX9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms