Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav7-5A0A0G2JFX6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7-5A0A0G2JFX6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gm42569-201ENSMUST00000200539 472 ntBASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-5A0A0G2JFX6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gm10849-201ENSMUST00000100397 618 ntBASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-5A0A0G2JFX6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-5A0A0G2JFX6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms