Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm9870-201ENSMUST00000063874 645 ntBASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav3n-3A0A0G2JEM0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3n-3A0A0G2JEM0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3n-3A0A0G2JEM0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms