Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Igkv5-43A0A0B4J1J2 BC021767-201ENSMUST00000126387 1716 ntBASIC19.14■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Gm37856-201ENSMUST00000191634 999 ntBASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms