Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv15A0A0A6YYE3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv15A0A0A6YYE3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm22238-201ENSMUST00000175222 88 ntBASIC15.49■□□□□ 0.07
Trbv15A0A0A6YYE3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv15A0A0A6YYE3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv15A0A0A6YYE3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trbv15A0A0A6YYE3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv15A0A0A6YYE3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv15A0A0A6YYE3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv15A0A0A6YYE3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Trbv15A0A0A6YYE3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv15A0A0A6YYE3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv15A0A0A6YYE3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv15A0A0A6YYE3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv15A0A0A6YYE3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Gm15820-201ENSMUST00000201566 728 ntBASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv15A0A0A6YYE3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms