Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv3A0A0A6YYE2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv3A0A0A6YYE2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trbv3A0A0A6YYE2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv3A0A0A6YYE2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.37□□□□□ -0.11
Trbv3A0A0A6YYE2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm8969-201ENSMUST00000199694 526 ntBASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv3A0A0A6YYE2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv3A0A0A6YYE2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms