Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-43A0A0A6YXN5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-43A0A0A6YXN5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Trmt13-210ENSMUST00000198454 880 ntBASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm44549-201ENSMUST00000208351 577 ntBASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm22240-201ENSMUST00000175225 82 ntBASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm2559-201ENSMUST00000201323 363 ntBASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm12896-201ENSMUST00000118430 226 ntBASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm13168-201ENSMUST00000121771 632 ntBASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-43A0A0A6YXN5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms