Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.12■□□□□ 0.33
Trbc1A0A0A6YWV4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Grk6-206ENSMUST00000224995 2971 ntBASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbc1A0A0A6YWV4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm13534-201ENSMUST00000121169 513 ntBASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trbc1A0A0A6YWV4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trbc1A0A0A6YWV4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trbc1A0A0A6YWV4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbc1A0A0A6YWV4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbc1A0A0A6YWV4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.08■□□□□ 0.33
Trbc1A0A0A6YWV4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbc1A0A0A6YWV4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbc1A0A0A6YWV4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm37179-201ENSMUST00000194862 823 ntBASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbc1A0A0A6YWV4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbc1A0A0A6YWV4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms