Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Gm28870A0A0A6YW38 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm28870A0A0A6YW38 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm28870A0A0A6YW38 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Rarb-207ENSMUST00000225921 2756 ntBASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28870A0A0A6YW38 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28870A0A0A6YW38 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28870A0A0A6YW38 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms