Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-4A0A075B6B4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 AV356131-201ENSMUST00000206201 750 ntBASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-4A0A075B6B4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Gm7514-201ENSMUST00000209475 934 ntBASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-4A0A075B6B4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Gm13534-201ENSMUST00000121169 513 ntBASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Gm42569-201ENSMUST00000200539 472 ntBASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-4A0A075B6B4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-4A0A075B6B4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav6-4A0A075B6B4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms