Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-3A0A075B695 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-3A0A075B695 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Gm43060-201ENSMUST00000200621 289 ntBASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-3A0A075B695 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-3A0A075B695 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Gm7860-201ENSMUST00000121190 879 ntBASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-3A0A075B695 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms