Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv1A0A075B657 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv1A0A075B657 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv1A0A075B657 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trdv1A0A075B657 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Golgb1-201ENSMUST00000023534 498 ntBASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv1A0A075B657 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.22□□□□□ -0.13
Trdv1A0A075B657 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv1A0A075B657 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv1A0A075B657 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv1A0A075B657 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv1A0A075B657 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv1A0A075B657 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv1A0A075B657 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trdv1A0A075B657 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.18□□□□□ -0.14
Trdv1A0A075B657 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms