Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 BC021767-201ENSMUST00000126387 1716 ntBASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Gm27801-201ENSMUST00000184174 223 ntBASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-4A0A075B652 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Gm26833-201ENSMUST00000180899 440 ntBASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Gm40848-201ENSMUST00000221998 324 ntBASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-4A0A075B652 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Gm43017-201ENSMUST00000198296 752 ntBASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-4A0A075B652 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav5-4A0A075B652 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-4A0A075B652 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-4A0A075B652 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav5-4A0A075B652 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-4A0A075B652 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-4A0A075B652 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Gm7860-201ENSMUST00000121190 879 ntBASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms