Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-3A0A075B645 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav14n-3A0A075B645 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav14n-3A0A075B645 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Gm9870-201ENSMUST00000063874 645 ntBASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav14n-3A0A075B645 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav14n-3A0A075B645 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav14n-3A0A075B645 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trav14n-3A0A075B645 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav14n-3A0A075B645 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav14n-3A0A075B645 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.08□□□□□ -0.16
Trav14n-3A0A075B645 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav14n-3A0A075B645 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav14n-3A0A075B645 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms