Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-2A0A075B638 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-2A0A075B638 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav4-2A0A075B638 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.78□□□□□ -0.04
Trav4-2A0A075B638 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Trav4-2A0A075B638 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-2A0A075B638 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.77□□□□□ -0.04
Trav4-2A0A075B638 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-2A0A075B638 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-2A0A075B638 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-2A0A075B638 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4-2A0A075B638 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4-2A0A075B638 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Fst-202ENSMUST00000223640 2612 ntBASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav4-2A0A075B638 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms