Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rps24-207ENSMUST00000224568 714 ntBASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm12922-201ENSMUST00000120626 809 ntBASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm45102-201ENSMUST00000207427 857 ntBASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm14117-201ENSMUST00000122417 843 ntBASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-1-dv6d-1A0A075B624 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms