Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7n-4A0A075B620 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7n-4A0A075B620 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav7n-4A0A075B620 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7n-4A0A075B620 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Etf1-202ENSMUST00000180351 108 ntBASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7n-4A0A075B620 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav7n-4A0A075B620 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms