Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16d-dv11A0A075B617 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16d-dv11A0A075B617 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Fst-202ENSMUST00000223640 2612 ntBASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16d-dv11A0A075B617 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16d-dv11A0A075B617 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Etf1-202ENSMUST00000180351 108 ntBASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16d-dv11A0A075B617 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16d-dv11A0A075B617 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16d-dv11A0A075B617 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16d-dv11A0A075B617 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16d-dv11A0A075B617 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16d-dv11A0A075B617 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms