Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv4A0A075B5I2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv4A0A075B5I2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.77■□□□□ 0.59
Trbv4A0A075B5I2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv4A0A075B5I2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trbv4A0A075B5I2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv4A0A075B5I2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Gm13534-201ENSMUST00000121169 513 ntBASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv4A0A075B5I2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Gm10493-201ENSMUST00000097270 612 ntBASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv4A0A075B5I2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trbv4A0A075B5I2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv4A0A075B5I2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv4A0A075B5I2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trbv4A0A075B5I2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv4A0A075B5I2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv4A0A075B5I2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms