Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm19148-201ENSMUST00000197045 429 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm17909-201ENSMUST00000207587 907 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm46313-201ENSMUST00000220463 547 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 CT033774.2-201ENSMUST00000222079 256 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 AC171241.2-201ENSMUST00000228744 892 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Fabp5l2-201ENSMUST00000072582 408 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Mir24-2-201ENSMUST00000083607 107 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm15433-201ENSMUST00000097671 891 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 AW822252-205ENSMUST00000192662 1352 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm37745-201ENSMUST00000193304 8163 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm12834-201ENSMUST00000121855 2829 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm12142-201ENSMUST00000117114 485 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm16044-201ENSMUST00000118475 450 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 BC002163-201ENSMUST00000121906 319 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm20430-201ENSMUST00000172474 207 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm29577-201ENSMUST00000186427 693 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm9723-201ENSMUST00000192100 457 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm6197-201ENSMUST00000192273 454 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm37977-201ENSMUST00000193096 721 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm19011-201ENSMUST00000221777 808 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm10029-201ENSMUST00000089635 330 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Vps53Q8CCB4 AC125074.1-201ENSMUST00000227970 1331 ntBASIC9.31□□□□□ -0.92
Vps53Q8CCB4 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm44141-201ENSMUST00000204231 1583 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm26014-201ENSMUST00000104405 132 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm13183-201ENSMUST00000118615 789 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm12219-201ENSMUST00000119198 443 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm11676-201ENSMUST00000120443 490 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm25266-201ENSMUST00000158521 304 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm29462-201ENSMUST00000191458 288 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 AC110236.1-201ENSMUST00000227807 527 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 AC154738.3-201ENSMUST00000227953 409 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 CT009550.3-201ENSMUST00000228542 455 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Gm44986-201ENSMUST00000206292 2829 ntBASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps53Q8CCB4 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms