Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Col18a1P39061 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Col18a1P39061 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm10302-201ENSMUST00000174433 3535 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm4073-201ENSMUST00000176792 3500 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm45873-201ENSMUST00000211865 1915 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm11445-201ENSMUST00000119101 532 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm22428-201ENSMUST00000158554 132 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm8046-201ENSMUST00000172151 616 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm26945-201ENSMUST00000183191 2011 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm29354-201ENSMUST00000187613 696 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm37177-201ENSMUST00000193768 417 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm43748-201ENSMUST00000202329 1233 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC10.26□□□□□ -0.77
Col18a1P39061 AC134917.2-201ENSMUST00000223354 124 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Col18a1P39061 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Scn3b-206ENSMUST00000176185 4090 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Gm45797-201ENSMUST00000212759 1921 ntBASIC10.25□□□□□ -0.77
Col18a1P39061 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Esrrb-204ENSMUST00000116402 4300 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Epb41l3-201ENSMUST00000080208 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Col18a1P39061 Gm15047-201ENSMUST00000118891 454 ntBASIC10.25□□□□□ -0.77
Col18a1P39061 Gm12773-201ENSMUST00000120134 587 ntBASIC10.25□□□□□ -0.77
Col18a1P39061 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC10.25□□□□□ -0.77
Col18a1P39061 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Col18a1P39061 Gm9274-201ENSMUST00000182505 984 ntBASIC10.25□□□□□ -0.77
Col18a1P39061 Gm10043-201ENSMUST00000210691 235 ntBASIC10.25□□□□□ -0.77
Col18a1P39061 AC159246.1-201ENSMUST00000214478 249 ntBASIC10.25□□□□□ -0.77
Col18a1P39061 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Col18a1P39061 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Col18a1P39061 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Gm42678-201ENSMUST00000197163 2221 ntBASIC10.25□□□□□ -0.77
Col18a1P39061 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Col18a1P39061 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Lrit1-201ENSMUST00000120052 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Col18a1P39061 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col18a1P39061 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Col18a1P39061 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Col18a1P39061 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col18a1P39061 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col18a1P39061 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col18a1P39061 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Col18a1P39061 Gm11370-201ENSMUST00000120583 260 ntBASIC10.24□□□□□ -0.77
Col18a1P39061 Gm13669-201ENSMUST00000122366 457 ntBASIC10.24□□□□□ -0.77
Col18a1P39061 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC10.24□□□□□ -0.77
Col18a1P39061 Gm24545-201ENSMUST00000158651 85 ntBASIC10.24□□□□□ -0.77
Col18a1P39061 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Col18a1P39061 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col18a1P39061 Gm29008-201ENSMUST00000189387 298 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms