Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm22927-201ENSMUST00000104268 131 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm24257-201ENSMUST00000104472 131 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm13674-201ENSMUST00000121276 823 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm5205-201ENSMUST00000182253 1003 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm7239-201ENSMUST00000220981 860 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 CT009550.3-201ENSMUST00000228542 455 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 AC154828.1-201ENSMUST00000220696 2810 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.05□□□□□ -0.96
Trim29Q8R2Q0 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm14036-201ENSMUST00000118248 480 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm13252-201ENSMUST00000119355 321 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm13921-201ENSMUST00000119411 463 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm11955-201ENSMUST00000119801 470 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm13586-201ENSMUST00000121784 464 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm23094-201ENSMUST00000157551 322 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm25082-201ENSMUST00000177296 255 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm26436-201ENSMUST00000180325 132 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm37506-201ENSMUST00000192008 143 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm43840-201ENSMUST00000199444 484 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim29Q8R2Q0 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm44834-201ENSMUST00000206671 1396 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm13407-201ENSMUST00000118256 360 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm12687-201ENSMUST00000119752 706 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm12870-201ENSMUST00000121383 1016 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Mir3060-201ENSMUST00000175339 83 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Mir6999-201ENSMUST00000183498 61 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm29462-201ENSMUST00000191458 288 ntBASIC9.03□□□□□ -0.96
Trim29Q8R2Q0 Gm36996-201ENSMUST00000194466 250 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms