Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcn1Q64347 AC159635.1-201ENSMUST00000220905 2102 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm16026-206ENSMUST00000163068 2741 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm14762-201ENSMUST00000105109 1771 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Pkia-201ENSMUST00000028999 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm45718-201ENSMUST00000207577 3794 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm11207-201ENSMUST00000117824 414 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC10.88□□□□□ -0.67
Clcn1Q64347 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 D630023F18Rik-202ENSMUST00000148020 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm4831-201ENSMUST00000174626 594 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 2900076A07Rik-203ENSMUST00000180879 725 ntTSL 3 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Mrgprc7-ps-201ENSMUST00000187169 952 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm5256-201ENSMUST00000191412 877 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm38249-201ENSMUST00000192560 2321 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm38330-201ENSMUST00000192743 959 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm7897-201ENSMUST00000193981 554 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm37371-201ENSMUST00000194837 392 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm42529-201ENSMUST00000201843 741 ntTSL 3 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm45698-201ENSMUST00000208537 1135 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm7203-201ENSMUST00000210880 1404 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm19987-201ENSMUST00000216339 499 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Clcn1Q64347 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC10.88□□□□□ -0.67
Clcn1Q64347 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcn1Q64347 AC121960.3-201ENSMUST00000227077 623 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Clcn1Q64347 AC122251.1-201ENSMUST00000227717 639 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 AC130673.2-201ENSMUST00000228091 797 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 AC137950.1-201ENSMUST00000228553 515 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm38272-201ENSMUST00000194431 2400 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm12187-201ENSMUST00000119584 1375 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Gm8605-201ENSMUST00000221619 1370 ntBASIC10.88□□□□□ -0.67
Clcn1Q64347 Prss35-202ENSMUST00000179574 3211 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Gpr1-201ENSMUST00000050536 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcn1Q64347 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm5743-202ENSMUST00000212004 1647 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm37957-201ENSMUST00000192182 2303 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 AC107757.2-201ENSMUST00000226370 1466 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Ddx1-201ENSMUST00000071103 4842 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Olfr214-205ENSMUST00000217313 2802 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 D830005E20Rik-201ENSMUST00000217716 1844 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Nedd4l-204ENSMUST00000224347 3150 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm24340-201ENSMUST00000104208 97 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm11259-201ENSMUST00000120554 715 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm23222-201ENSMUST00000158117 76 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm24498-201ENSMUST00000158445 102 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm23195-201ENSMUST00000158814 129 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Olfr93-201ENSMUST00000171679 1045 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm27225-201ENSMUST00000183833 557 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm27350-201ENSMUST00000185109 98 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm28503-201ENSMUST00000185966 147 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms