Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cchcr1Q8K2I2 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cchcr1Q8K2I2 Gm43161-201ENSMUST00000197020 1688 ntBASIC9.36□□□□□ -0.91
Cchcr1Q8K2I2 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm25780-201ENSMUST00000122528 253 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm22847-201ENSMUST00000157707 105 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm10182-201ENSMUST00000178676 273 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm43287-201ENSMUST00000197747 600 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 AC123920.1-201ENSMUST00000221449 384 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm13456-201ENSMUST00000118928 1365 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Gm38331-201ENSMUST00000195719 2671 ntBASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.35□□□□□ -0.91
Cchcr1Q8K2I2 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm37496-201ENSMUST00000191930 2509 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm12883-201ENSMUST00000117867 364 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm14036-201ENSMUST00000118248 480 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm11922-201ENSMUST00000118967 475 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm12687-201ENSMUST00000119752 706 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm8813-201ENSMUST00000155930 595 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm23533-201ENSMUST00000157540 245 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm26505-201ENSMUST00000176208 166 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm8952-201ENSMUST00000206828 1102 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 AC130829.2-201ENSMUST00000222931 127 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 CT571271.1-201ENSMUST00000227071 670 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Gm38315-201ENSMUST00000194286 2437 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 AC122878.1-201ENSMUST00000227716 1460 ntBASIC9.34□□□□□ -0.91
Cchcr1Q8K2I2 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cchcr1Q8K2I2 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms