Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.24□□□□□ -0.93
Alx1Q8C8B0 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Alx1Q8C8B0 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm22022-201ENSMUST00000104355 127 ntBASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm8529-201ENSMUST00000183298 745 ntBASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm27680-202ENSMUST00000199221 807 ntBASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm4270-201ENSMUST00000209666 406 ntBASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Alx1Q8C8B0 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm7831-201ENSMUST00000117990 552 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm12072-201ENSMUST00000118293 715 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm12024-201ENSMUST00000118819 1253 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 BC002163-201ENSMUST00000121906 319 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm22670-201ENSMUST00000158724 143 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm8304-201ENSMUST00000185744 584 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm18033-201ENSMUST00000186678 550 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm9451-201ENSMUST00000188491 604 ntBASIC9.22□□□□□ -0.93
Alx1Q8C8B0 Gm5251-201ENSMUST00000188959 472 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms