Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm22374-201ENSMUST00000104583 132 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Gm12024-201ENSMUST00000118819 1253 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Gm12369-201ENSMUST00000121343 942 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm22728-201ENSMUST00000158087 129 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC10.3□□□□□ -0.76
Col18a1P39061 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm18799-201ENSMUST00000189104 913 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Gm7019-201ENSMUST00000194122 369 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Gm7452-201ENSMUST00000200764 788 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm7413-201ENSMUST00000219498 462 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 AC114572.1-201ENSMUST00000227262 300 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Col18a1P39061 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Col18a1P39061 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm37465-201ENSMUST00000192845 3290 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Wdhd1-202ENSMUST00000111792 4174 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm1559-201ENSMUST00000219596 3117 ntTSL 3 BASIC10.3□□□□□ -0.76
Col18a1P39061 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 n-R5s1-201ENSMUST00000101925 119 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Gm24709-201ENSMUST00000104123 132 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Gm12439-201ENSMUST00000117162 365 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Gm5228-201ENSMUST00000117186 357 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm8540-201ENSMUST00000168952 732 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC10.29□□□□□ -0.76
Col18a1P39061 AC099934.1-201ENSMUST00000200493 79 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm22684-201ENSMUST00000082849 132 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 n-R5s60-201ENSMUST00000083299 119 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
Col18a1P39061 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Col18a1P39061 Ccnc-201ENSMUST00000065928 3484 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm20749-201ENSMUST00000186319 3492 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm11895-201ENSMUST00000122165 467 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Gm13366-201ENSMUST00000122198 970 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm29385-201ENSMUST00000186831 363 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm4751-201ENSMUST00000200620 1105 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Gm34583-203ENSMUST00000202586 454 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Gm5528-201ENSMUST00000076314 480 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Col18a1P39061 AC156802.2-203ENSMUST00000226032 1906 ntBASIC10.29□□□□□ -0.76
Col18a1P39061 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Col18a1P39061 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC10.29□□□□□ -0.76
Col18a1P39061 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col18a1P39061 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col18a1P39061 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms