Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm8153-201ENSMUST00000219844 952 ntBASIC8.59□□□□□ -1.03
Sox1P53783 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC8.59□□□□□ -1.03
Sox1P53783 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 Gm18955-201ENSMUST00000223173 649 ntBASIC8.59□□□□□ -1.03
Sox1P53783 AC139294.2-201ENSMUST00000227159 285 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Sox1P53783 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Sox1P53783 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Sox1P53783 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Gm38169-201ENSMUST00000191822 2539 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Npy4r-201ENSMUST00000052164 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Cdc5l-201ENSMUST00000024727 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 AC131029.1-201ENSMUST00000226391 2929 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.59□□□□□ -1.03
Sox1P53783 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 AC164625.1-201ENSMUST00000214034 3036 ntBASIC8.59□□□□□ -1.04
Sox1P53783 Grk2-201ENSMUST00000025791 3182 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Sox1P53783 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Sox1P53783 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Sox1P53783 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Gnpda2-206ENSMUST00000166298 1755 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm2098-201ENSMUST00000189146 1763 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Depdc5-201ENSMUST00000049780 3569 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Clec7a-201ENSMUST00000112076 2277 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm13915-201ENSMUST00000119314 931 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm12331-201ENSMUST00000119927 622 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm12459-201ENSMUST00000120659 356 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm2976-201ENSMUST00000160362 513 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Gm20530-201ENSMUST00000174261 254 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm37669-201ENSMUST00000192184 820 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm43044-201ENSMUST00000198091 379 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm44180-201ENSMUST00000203671 408 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm43934-201ENSMUST00000205095 388 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm18988-201ENSMUST00000205601 746 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm4536-201ENSMUST00000209157 542 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Gm45294-201ENSMUST00000210685 2102 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm5173-201ENSMUST00000219616 950 ntBASIC8.58□□□□□ -1.04
Sox1P53783 AC107711.5-201ENSMUST00000228149 594 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Sox1P53783 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Sox1P53783 Rnf43-201ENSMUST00000040089 3670 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Habp2-206ENSMUST00000166049 1650 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Cdh16-213ENSMUST00000212882 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Helb-201ENSMUST00000020449 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sox1P53783 Bcas3-206ENSMUST00000108062 3724 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm45354-201ENSMUST00000199820 2557 ntBASIC8.58□□□□□ -1.04
Sox1P53783 Acsl6-205ENSMUST00000094194 2554 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
Sox1P53783 Gm19144-201ENSMUST00000221921 1859 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Tcaf1-203ENSMUST00000121083 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm44897-201ENSMUST00000206187 1341 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm43795-201ENSMUST00000202051 2366 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms