Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Wfdc11-202ENSMUST00000167694 249 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm22347-201ENSMUST00000180276 132 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm2076-201ENSMUST00000182524 971 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm8048-201ENSMUST00000182555 996 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b1-201ENSMUST00000183812 216 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b4-201ENSMUST00000184171 215 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm8151-201ENSMUST00000184817 871 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b2-201ENSMUST00000185073 215 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm37908-201ENSMUST00000195828 470 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b2-202ENSMUST00000196353 216 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b3-202ENSMUST00000198628 215 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b4-202ENSMUST00000199460 216 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b1-202ENSMUST00000200547 215 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC124542.1-201ENSMUST00000205588 908 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm18537-201ENSMUST00000205709 989 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC164614.1-201ENSMUST00000216038 397 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Olfr271-ps1-202ENSMUST00000217546 852 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC144461.2-201ENSMUST00000218219 303 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC133087.1-201ENSMUST00000221837 148 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC123935.1-201ENSMUST00000225588 409 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC116596.2-201ENSMUST00000226642 526 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC163646.4-201ENSMUST00000228271 295 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Apoh-201ENSMUST00000000049 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm8849-201ENSMUST00000058951 480 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Olfr15-201ENSMUST00000080917 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm22362-201ENSMUST00000083102 134 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Rnu3b3-201ENSMUST00000093738 216 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Selenop-203ENSMUST00000159216 2085 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 AC154634.1-201ENSMUST00000225225 2394 ntBASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Blzf1-201ENSMUST00000027866 3948 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Olfr700-202ENSMUST00000214840 1505 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Mns1-201ENSMUST00000034746 5250 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Ctnna1-201ENSMUST00000042345 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Nr1h3-201ENSMUST00000002177 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim39Q9ESN2 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm7444-201ENSMUST00000217455 2428 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm10384-201ENSMUST00000100713 2046 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Arnt-202ENSMUST00000090804 4325 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm11199-201ENSMUST00000118691 507 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm14524-201ENSMUST00000121066 683 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm15727-201ENSMUST00000122416 437 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 8430436N08Rik-201ENSMUST00000129988 1077 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm23317-201ENSMUST00000157999 129 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm26167-201ENSMUST00000158423 253 ntBASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Kank3-204ENSMUST00000173789 783 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 Olfr126-201ENSMUST00000174139 960 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim39Q9ESN2 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms