Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm12838-201ENSMUST00000116278 325 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm5948-201ENSMUST00000219627 839 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 AL844586.1-201ENSMUST00000224297 1042 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 AC154595.1-201ENSMUST00000225533 1059 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 AC140208.1-201ENSMUST00000226609 285 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Olfr888-201ENSMUST00000075228 945 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm26264-201ENSMUST00000083278 159 ntBASIC9.54□□□□□ -0.88
Vps54Q5SPW0 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm4863-201ENSMUST00000196907 1381 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Fau-ps2-201ENSMUST00000119333 371 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm13921-201ENSMUST00000119411 463 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm12611-201ENSMUST00000119452 1037 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm11955-201ENSMUST00000119801 470 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm13586-201ENSMUST00000121784 464 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm22224-201ENSMUST00000157357 93 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm23663-201ENSMUST00000158045 80 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm20396-201ENSMUST00000173358 745 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm24576-201ENSMUST00000175508 248 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm5698-201ENSMUST00000178317 724 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm8896-201ENSMUST00000197434 1106 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm43840-201ENSMUST00000199444 484 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm42760-201ENSMUST00000199814 311 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm4270-201ENSMUST00000209666 406 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm16391-201ENSMUST00000086601 447 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm5605-201ENSMUST00000208940 1305 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Vps54Q5SPW0 AC164437.4-204ENSMUST00000227169 4024 ntBASIC9.53□□□□□ -0.88
Vps54Q5SPW0 Gm37980-201ENSMUST00000194420 1910 ntBASIC9.52□□□□□ -0.88
Vps54Q5SPW0 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Vps54Q5SPW0 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Vps54Q5SPW0 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Vps54Q5SPW0 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.88
Vps54Q5SPW0 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.52□□□□□ -0.88
Vps54Q5SPW0 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Vps54Q5SPW0 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Mir763-201ENSMUST00000103249 120 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm10651-201ENSMUST00000118212 609 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm12727-201ENSMUST00000119885 359 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm11259-201ENSMUST00000120554 715 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms